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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876640.1_cds_XP_016436180.1_32066
CDS Infomation

[gene=LOC107762350] [db_xref=GeneID:107762350] [protein=cystathionine gamma-synthase 1, chloroplastic-like] [protein_id=XP_016436180.1] [location=join(58092..58530,62591..62694,62937..63010,63148..63316,63579..63638,63735..63938,64033..64119,64618..64725,65159..65254,65352..65470,66109..66232)] [gbkey=CDS]
Sequence

ATGGCTGTCTCCAGCTTTGCTAGGGTAATTCCGTCATTCGAATGCCGTTCGGACCCCGAT
TTCTCCGGCAGTCTTCCGCCCCCGAAAGCCGGCGTTCGATTCCCCGGCAAGGCTAGCTCG
GTGAGTCACCCATCTCAAGTACACGGCCTGTCTTCTCTGATATTCCGGTTTCCGCCGAAC
TTCGTGAGGCAGCTAAGCATTAAGGCTCGGAGGAACTGCAGCAACATCGGCGTGGCTCAA
GTTGTGGCGGCGTCGTGGTCCAACAACCATGCCGGTCCTGACTTCACTCCGGCGGCTAAT
GCCGTCGATTCCTCCGCCGTTGCTCCGCTGGTGGAAAATGCGGCTTTTAATGATGAAACT
GTACAGATTGAGGGTTTTACAGGTGTTAATAAATACGCTTCGTTTTTGAATTCCGATGGA
AGCGTCGCTATTCATGCCGGTGAAAGGTTGGGACGCGGTATTGTTACTGATGCCATAACT
ACCCCAGTGGTTAACACGTCTGCTTACTTCTTCAATAAAACTTCTGACCTTATTGATTTC
AAGGAGAAAAGACGTGCAAGTTTTGAATATGGGCGCTATGGTAACCCCACTACTGTTGTT
CTAGAGGAGAAAATAAGTGCACTCGAGGGCGCTGAATCAACCTTGGTAATGGCATCTGGA
ATGTGTGCCAGTACTGTAATGCTGTTGGCCTTGGTTCCTGCTGGTGGCCATATTGTAACA
ACCACAGATTGCTACCGGAAGACCCGTATTTTTATTGAGACGATACTGCCTAAAATGGGA
ATTACGGCCACAGTCATTGATCCAGCGGATATTGGAGCTTTGGAGTTAGCACTAAATCAG
AAGAAAGTGAATCTTTTCTTTACCGAGTCTCCAACAAATCCATTCCTGAGATGTGTTGAC
ATTGAGCTGGTTTCAAAGCTTTGTCATGAAAATGGAGCCTTGGTTTGCATAGACGGGACG
TTTGCGACTCCTCTTAACCAAAAGGCCCTTGCTCTAGGGGCTGACCTTGTTCTGCACTCT
GCTACAAAATTCCTTGGTGGGCACAATGATGTTCTTGCAGGTTGCATTAGTGGTCCTTTA
GAATTAGTTTCAGTAGTTCGAAACTTGCATCATATCCTCGGTGGTGCTATCAATCCAAAT
GCTGCATATCTTATCATCCGAGGCATGAAGACGCTGCATCTTCGTGTACAGCAACAAAAC
TCAACTGCATTGAGGATGGCCGAGATTTTAGAGGCTCATCCCAAGGTGAAACATGTCTAT
TATCCAGGGTTGCAGAGTCATCCAGAATATCATATTGCAAAGAAACAAATGACTGGCTTT
GGTGGTGTGGTCAGTTTTGAGGTTGACGGAGACCTCCTAACTACTGCAAAATTTGTGGAT
GCTCTGAGAATTCCCTATATTGCTCCATCATTTGGAGGTTGTGAGAGCATTGTGGACCAA
CCAGCAATAATGTCTTACTGGGATCTTTCCCAGTCAGATAGAGCCAAGTATGGGATCATG
GACAACTTGGTTCGGTTCAGCTTCGGAGTGGAAGACTTTGAAGACGTGAAAGCTGATGTT
CTTCAGGCTTTGGAGTCCATATAG

Peptide Sequence

PEP ID

XP_016436180.1
PEP Infomation

PREDICTED: cystathionine gamma-synthase 1, chloroplastic-like [Nicotiana tabacum]
Sequence

MAVSSFARVIPSFECRSDPDFSGSLPPPKAGVRFPGKASSVSHPSQVHGLSSLIFRFPPN
FVRQLSIKARRNCSNIGVAQVVAASWSNNHAGPDFTPAANAVDSSAVAPLVENAAFNDET
VQIEGFTGVNKYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSDLIDF
KEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLVMASGMCASTVMLLALVPAGGHIVT
TTDCYRKTRIFIETILPKMGITATVIDPADIGALELALNQKKVNLFFTESPTNPFLRCVD
IELVSKLCHENGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPL
ELVSVVRNLHHILGGAINPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVKHVY
YPGLQSHPEYHIAKKQMTGFGGVVSFEVDGDLLTTAKFVDALRIPYIAPSFGGCESIVDQ
PAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFEDVKADVLQALESI

Transcript Sequence

Gene sequence data has not been registered.